STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42473.1Pfam:pfam00069 Protein kinase domain. (885 aa)    
Predicted Functional Partners:
AKS42474.1
RNA polymerase sigma-70 ECF-like protein; Pfam:pfam07638 ECF sigma factor.
 
 
   0.871
AKS41450.1
Pfam:pfam00481 Protein phosphatase 2C.
 
   0.828
AKS40917.1
Pfam:pfam13672 Protein phosphatase 2C.
 
   0.824
AKS41542.1
RNA polymerase sigma 70; Pfam:pfam07638 ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.733
AKS42688.1
RNA polymerase, sigma subunit, ECF family; Pfam:pfam07638 ECF sigma factor.
 
 
   0.731
AKS41069.1
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein; Pfam:pfam07638 ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.731
AKS41110.1
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein; Pfam:pfam07638 ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.731
AKS42859.1
Hypothetical protein; Pfam:pfam07638 ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.729
AKS41165.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Pfam:pfam07638 ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.728
AKS42490.1
RNA polymerase sigma 70; Pfam:pfam07638 ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.727
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.