STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42580.1Hypothetical protein. (231 aa)    
Predicted Functional Partners:
AKS43253.1
Pfam:pfam11231 Protein of unknown function (DUF3034).
 
     0.697
AKS43254.1
Putative Globin-like protein; Pfam:pfam01152 Bacterial-like globin.
 
     0.649
AKS42579.1
Membrane protein; Pfam:pfam09834 Predicted membrane protein (DUF2061).
       0.601
AKS42581.1
Pfam:pfam00069 Protein kinase domain.
       0.597
AKS41585.1
Hypothetical protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
  
 
 0.535
AKS43027.1
Hypothetical protein; Pfam:pfam13205 Bacterial Ig-like domain.
  
   0.532
AKS43273.1
Hypothetical protein; Pfam:pfam13205 Bacterial Ig-like domain.
  
   0.532
AKS41038.1
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
   
 
 0.514
AKS40994.1
NADH:ubiquinone oxidoreductase subunit M; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains.
    
   0.461
AKS41816.1
Hypothetical protein; Pfam:pfam13582 Metallo-peptidase family M12B Reprolysin-like.
   
   0.453
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.