STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42754.1Hypothetical protein; Pfam:pfam13692 Glycosyl transferases group 1. (366 aa)    
Predicted Functional Partners:
AKS42755.1
Hypothetical protein; Pfam:pfam13579 Glycosyl transferase 4-like domain.
     0.965
AKS42750.1
Pfam:pfam00534 Glycosyl transferases group 1.
 
     0.858
AKS42749.1
Pfam:pfam01041 DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.803
AKS42753.1
Hypothetical protein; Pfam:pfam14897 EpsG family.
  
  
 0.789
AKS42752.1
Hypothetical protein; Pfam:pfam13535 ATP-grasp domain.
       0.775
AKS42751.1
Pfam:pfam04794 YdjC-like protein.
       0.773
AKS42756.1
Pfam:pfam00534 Glycosyl transferases group 1.
       0.773
AKS42764.1
Hypothetical protein; Pfam:pfam13614 AAA domain.
 
  
 0.543
AKS42384.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.532
AKS42758.1
Pfam:pfam01943 Polysaccharide biosynthesis protein.
 
  
 0.523
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.