STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42814.1Pfam:pfam01458 Uncharacterized protein family (UPF0051). (395 aa)    
Predicted Functional Partners:
AKS42815.1
Cysteine desulfurase; Pfam:pfam00005 ABC transporter.
 
 0.999
AKS42817.1
Cysteine desulfurase; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
 
0.999
AKS42813.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.996
AKS42812.1
Hypothetical protein; Pfam:pfam01592 NifU-like N terminal domain.
 
  
 0.893
AKS43074.1
FeS assembly SUF system protein SufT; Pfam:pfam01883 Domain of unknown function DUF59.
 
   
 0.805
AKS42818.1
Pfam:pfam02082 Transcriptional regulator.
 
   
 0.790
AKS41481.1
SufE protein probably involved in Fe-S center assembly; Pfam:pfam02657 Fe-S metabolizm associated domain.
 
 
 0.778
AKS42816.1
NADH:ubiquinone oxidoreductase subunit 5; Pfam:pfam13366 PD-(D/E)XK nuclease superfamily.
  
    0.690
AKS41557.1
Cysteine desulfurase; Pfam:pfam00266 Aminotransferase class-V.
  
 
 0.683
AKS41345.1
Glutaredoxin; Pfam:pfam00462 Glutaredoxin.
  
 
 0.642
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.