STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42845.1Pfam:pfam05137 Fimbrial assembly protein (PilN). (190 aa)    
Predicted Functional Partners:
AKS42846.1
Pfam:pfam11104 Type IV pilus assembly protein PilM.
 
 
 0.996
AKS42844.1
Fimbrial protein; Pfam:pfam04350 Pilus assembly protein, PilO.
 
 
 0.994
AKS42842.1
Type IV pilus biogenesis protein PilQ; Pfam:pfam00263 Bacterial type II and III secretion system protein.
 
 
 0.992
AKS42843.1
Fimbrial protein; Pfam:pfam04351 Pilus assembly protein, PilP.
 
 
 0.992
AKS40700.1
Hypothetical protein; Pfam:pfam01476 LysM domain.
  
 
   0.873
AKS40637.1
Pilus assembly protein PilE; Pfam:pfam13544 Type IV pilin N-term methylation site GFxxxE.
 
  
 0.829
AKS42413.1
Hypothetical protein.
  
  
 0.824
AKS41949.1
Type IV pilus assembly PilZ; Pfam:pfam07238 PilZ domain.
  
   
 0.805
AKS40633.1
Hypothetical protein.
 
   
 0.802
AKS40635.1
Tfp pilus assembly protein, tip-associated adhesin PilY1; Pfam:pfam05567 Neisseria PilC beta-propeller domain.
 
  
 0.798
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.