STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42887.1Hypothetical protein; Pfam:pfam00563 EAL domain. (744 aa)    
Predicted Functional Partners:
AKS41949.1
Type IV pilus assembly PilZ; Pfam:pfam07238 PilZ domain.
    
   0.965
WM2015_44
Hypothetical protein; Pfam:pfam03707 Bacterial signalling protein N terminal repeat.
 
  
 0.939
AKS42434.1
Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.
 
  
 0.907
WM2015_31
Pfam:pfam00909 Ammonium Transporter Family.
      0.862
AKS41353.1
Sensory box/GGDEF family protein; Pfam:pfam00563 EAL domain.
 
 
0.827
AKS40746.1
CheA signal transduction histidine kinase; Pfam:pfam00072 Response regulator receiver domain.
 
  
 0.821
AKS41098.1
Sensory box/GGDEF domain/EAL domain protein; Pfam:pfam00563 EAL domain.
 
 
0.820
AKS42313.1
Hypothetical protein; Pfam:pfam00563 EAL domain.
 
 
0.816
AKS43093.1
Response regulator receiver modulated diguanylate cyclase; Pfam:pfam00990 GGDEF domain.
 
0.806
AKS43079.1
PAS sensor diguanylate cyclase and phosphodiesterase; Pfam:pfam00563 EAL domain.
 
  
0.802
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.