STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS42995.1Methyltransferase. (319 aa)    
Predicted Functional Partners:
AKS42769.1
Pfam:pfam00593 TonB dependent receptor.
  
     0.748
AKS41426.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
     0.705
AKS41140.1
Hypothetical protein; Pfam:pfam13372 Alginate export.
  
     0.694
AKS41220.1
Pfam:pfam00593 TonB dependent receptor.
  
     0.655
AKS43315.1
Pfam:pfam14905 Outer membrane protein beta-barrel family.
  
     0.653
AKS41401.1
Pfam:pfam00593 TonB dependent receptor.
  
     0.606
AKS42960.1
Pfam:pfam05960 Bacterial protein of unknown function (DUF885).
  
    0.601
AKS43303.1
Membrane protein; Pfam:pfam00593 TonB dependent receptor.
  
     0.596
AKS40858.1
Hypothetical protein.
  
     0.575
AKS42996.1
Hypothetical protein.
       0.565
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.