STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS43127.1Hypothetical protein; Pfam:pfam13511 Domain of unknown function (DUF4124). (188 aa)    
Predicted Functional Partners:
AKS43128.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.811
ntrC
Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
       0.778
AKS43126.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
       0.608
AKS42959.1
Extracellular lipase, Pla-1/cef family; Pfam:pfam12262 Bacterial virulence factor lipase N-terminal.
  
     0.601
AKS42445.1
Pfam:pfam03872 Anti sigma-E protein RseA, N-terminal domain.
  
     0.580
AKS40827.1
Hypothetical protein; Pfam:pfam13511 Domain of unknown function (DUF4124).
  
     0.520
AKS41039.1
Hypothetical protein; Pfam:pfam09413 Domain of unknown function (DUF2007).
  
     0.514
AKS41907.1
Hypothetical protein.
  
     0.497
AKS42260.1
Hypothetical protein; Pfam:pfam11356 Type IV pilus biogenesis.
  
     0.493
AKS43092.1
Hypothetical protein.
  
     0.476
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.