STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS40665.1Pfam:pfam00106 short chain dehydrogenase. (272 aa)    
Predicted Functional Partners:
AKS40664.1
Hypothetical protein; Pfam:pfam13302 Acetyltransferase (GNAT) domain.
     
 0.776
AKS41038.1
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
 0.658
AKS41528.1
Hypothetical protein; Pfam:pfam00884 Sulfatase.
   
 
 0.591
AKS40661.1
Hypothetical protein; Pfam:pfam13180 PDZ domain.
   
  0.535
AKS40662.1
Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA.
       0.531
AKS40663.1
Hypothetical protein; Pfam:pfam08281 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily.
       0.531
AKS41940.1
Malonyl CoA-acyl carrier protein transacylase; Pfam:pfam00698 Acyl transferase domain.
 
 
 0.483
AKS42068.1
Hypothetical protein; Pfam:pfam00106 short chain dehydrogenase.
  
     0.482
AKS41943.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.451
AKS42872.1
Histidine kinase; Pfam:pfam12860 PAS fold.
    
 
 0.451
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.