STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41008.1Putative glycosyltransferase; Pfam:pfam00535 Glycosyl transferase family 2. (362 aa)    
Predicted Functional Partners:
AKS40879.1
Hypothetical protein; Pfam:pfam01061 ABC-2 type transporter.
 
  
 0.747
AKS42383.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.729
AKS42681.1
Putative riboflavin biosynthesis protein; Pfam:pfam06574 FAD synthetase; Belongs to the ribF family.
 
      0.729
AKS40880.1
Sugar ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
  
 0.677
AKS42384.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.674
AKS41793.1
Glycosyl transferase family 2; Pfam:pfam13231 Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
  
 0.638
AKS41009.1
(p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.556
AKS42764.1
Hypothetical protein; Pfam:pfam13614 AAA domain.
 
  
 0.550
AKS41029.1
Hypothetical protein; Pfam:pfam04932 O-Antigen ligase.
 
  
 0.484
AKS42386.1
dTDP-glucose 4,6-dehydratase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.479
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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