STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41265.1Pfam:pfam13520 Amino acid permease. (425 aa)    
Predicted Functional Partners:
AKS40888.1
Pfam:pfam00069 Protein kinase domain.
    
 0.594
AKS41264.1
Hypothetical protein.
       0.474
AKS41266.1
Pfam:pfam01965 DJ-1/PfpI family.
   
   0.441
AKS42872.1
Histidine kinase; Pfam:pfam12860 PAS fold.
  
 
 0.418
AKS43185.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.406
AKS40916.1
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Pfam:pfam02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.401
AKS41409.1
Glutamate synthase, large subunit; Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.400
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.