STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS41277.1Pfam:pfam12006 Protein of unknown function (DUF3500). (370 aa)    
Predicted Functional Partners:
AKS41278.1
Pfam:pfam09694 Bacterial protein of unknown function (Gcw_chp).
       0.773
AKS41276.1
Hypothetical protein; Pfam:pfam01244 Membrane dipeptidase (Peptidase family M19).
       0.517
AKS41198.1
Biphenyl-2,3-diol 1,2-dioxygenase 2; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
    0.504
AKS42833.1
Amidohydrolase; Pfam:pfam13147 Amidohydrolase.
  
     0.478
AKS41281.1
Hypothetical protein; Pfam:pfam00149 Calcineurin-like phosphoesterase.
  
     0.454
AKS40910.1
Putative Zn-dependent peptidase; Pfam:pfam05193 Peptidase M16 inactive domain; Belongs to the peptidase M16 family.
  
     0.432
AKS41279.1
Pfam:pfam09694 Bacterial protein of unknown function (Gcw_chp).
       0.422
Your Current Organism:
Wenzhouxiangella marina
NCBI taxonomy Id: 1579979
Other names: CGMCC 1.14936, Chromatiales bacterium Ma-11, KCTC 42284, MCCC 1K00261, W. marina, Wenzhouxiangella marina Wang et al. 2015, strain Ma-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.