STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY11889.1PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: amr:AM1_B0041 acetyltransferase. (357 aa)    
Predicted Functional Partners:
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.774
ADY11890.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: cbl:CLK_0432 acetyltransferase.
       0.773
ADY11892.1
YhhN family protein; PFAM: YhhN-like; KEGG: sgr:SGR_5669 hypothetical protein.
       0.773
ADY11894.1
PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; KEGG: ssm:Spirs_4003 DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal.
  
  
 0.589
ADY11893.1
KEGG: tde:TDE2245 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain.
     
 0.562
ADY11888.1
KEGG: ssm:Spirs_0284 protein of unknown function DUF21; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core.
       0.557
ADY11895.1
PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: bvu:BVU_0383 ribosomal large subunit pseudouridine synthase D.
       0.550
leuS
TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: ssm:Spirs_0283 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.505
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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