STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY11998.1PFAM: Protein of unknown function DUF1801; KEGG: ccb:Clocel_0157 hypothetical protein. (144 aa)    
Predicted Functional Partners:
ADY11997.1
PFAM: Protein of unknown function DUF1905; KEGG: sub:SUB0941 hypothetical protein.
    0.983
ADY11999.1
PFAM: Methyltransferase type 11; KEGG: mpi:Mpet_0248 type 11 methyltransferase.
 
     0.802
ADY12000.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dsy:DSY2844 hypothetical protein.
       0.773
ADY14334.1
PFAM: Uncharacterised conserved protein UCP033199; KEGG: uncharacterized conserved protein UCP033199.
      0.725
ADY12002.1
KEGG: gym:GYMC10_4792 hypothetical protein.
 
     0.668
ADY12001.1
PFAM: Peptidase M23; KEGG: nth:Nther_0268 peptidase M23.
       0.608
ADY11996.1
KEGG: clo:HMPREF0868_0519 hypothetical protein.
       0.501
ADY12003.1
PFAM: Major facilitator superfamily MFS-1; KEGG: elm:ELI_1208 macrolide-efflux protein.
       0.422
ADY11994.1
KEGG: ere:EUBREC_2355 hypothetical protein.
 
     0.415
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.