STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY12147.1PFAM: Amine oxidase; KEGG: fno:Fnod_0544 amine oxidase. (535 aa)    
Predicted Functional Partners:
ADY14498.1
KEGG: mth:MTH1808 phytoene synthase; PFAM: Squalene/phytoene synthase.
 
  
 0.881
ADY13704.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: putative oxidoreductase.
 
   
 0.755
ADY12885.1
KEGG: mmh:Mmah_0121 hypothetical protein.
 
     0.689
ADY12563.1
KEGG: mla:Mlab_1274 nitrogenase subunit NifH (ATPase)-like protein.
  
     0.651
ADY12601.1
KEGG: sta:STHERM_c17700 hypothetical protein.
  
  
 0.606
ADY12509.1
PFAM: Flavodoxin/nitric oxide synthase; KEGG: tle:Tlet_1577 flavodoxin.
 
   
 0.590
ADY13372.1
KEGG: sus:Acid_1464 hypothetical protein.
  
     0.585
ADY11994.1
KEGG: ere:EUBREC_2355 hypothetical protein.
  
     0.470
ADY12148.1
Hypothetical protein.
       0.457
ADY13927.1
PFAM: Peptidase M24, structural domain; Creatinase; KEGG: dal:Dalk_0504 peptidase M24.
 
    0.441
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.