STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY12215.1KEGG: vsp:VS_0225 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ. (185 aa)    
Predicted Functional Partners:
ADY12740.1
TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: ccb:Clocel_3670 undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase.
  
  
 0.768
ADY12214.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: bad:BAD_1506 nucleoside-diphosphate-sugar epimerases-like.
  
  
 0.750
ADY12213.1
KEGG: hypothetical protein.
       0.712
ADY13827.1
Capsular exopolysaccharide family; KEGG: pmo:Pmob_0944 exopolysaccharide tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein; PFAM: Lipopolysaccharide biosynthesis.
  
  
 0.572
ADY12212.1
PFAM: Bacterial alpha-L-rhamnosidase; KEGG: phe:Phep_3974 alpha-L-rhamnosidase.
       0.557
ADY12216.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.547
ADY12092.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bce:BC5273 UDP-bacillosamine synthetase.
  
  
 0.529
ADY13076.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ssm:Spirs_1533 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.529
ADY13957.1
KEGG: ssm:Spirs_0032 hypothetical protein.
  
  
 0.529
ADY14363.1
Hpt sensor hybrid histidine kinase; KEGG: cst:CLOST_1047 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Extracellular solute-binding protein, family 3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Extracellular solute-binding protein, family 3; Signal transduction response regulator, rec [...]
 
  
 0.520
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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