STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY12376.1KEGG: amt:Amet_1589 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter. (390 aa)    
Predicted Functional Partners:
ADY12281.1
PFAM: Chromate transporter; KEGG: eel:EUBELI_20041 chromate transporter.
  
     0.685
ADY13298.1
PFAM: Chromate transporter; KEGG: pmo:Pmob_1095 chromate transporter.
  
     0.655
ADY14497.1
PFAM: Protein of unknown function DUF422; KEGG: mtt:Ftrac_1977 hypothetical protein.
  
     0.649
ADY12377.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: dps:DP1348 hypothetical protein.
 
     0.608
ADY13123.1
SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; KEGG: ssm:Spirs_1866 PUR-alpha/beta/gamma DNA/RNA-binding protein.
  
     0.485
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.