STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY12504.1KEGG: tna:CTN_1540 sugar:cation symporter family protein. (479 aa)    
Predicted Functional Partners:
ADY12505.1
Alpha-glucosidase; KEGG: bmq:BMQ_3646 glycosyl hydrolase, family 31; PFAM: Glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.834
ADY12506.1
KEGG: tte:TTE1931 hypothetical protein.
       0.773
ADY13521.1
Manually curated; PFAM: Phospholipid/glycerol acyltransferase; KEGG: syn:slr2060 hypothetical protein; SMART: Phospholipid/glycerol acyltransferase.
  
     0.505
ADY12507.1
KEGG: bln:Blon_0026 ATPase (AAA+ superfamily)-like protein.
       0.469
ADY12355.1
KEGG: bha:BH3683 xylan beta-1,4-xylosidase; PFAM: Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.405
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.