STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY12688.1PFAM: Glycosyl hydrolase, family 88; KEGG: rec:RHECIAT_PC0000516 putative glucoronyl hydrolase protein. (382 aa)    
Predicted Functional Partners:
ADY12689.1
PFAM: Heparinase II/III-like; KEGG: csh:Closa_4172 heparinase II/III family protein.
 
    0.938
ADY12687.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00317 sugar ABC transporter, permease protein.
 
    0.832
ADY12686.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120664 putative permease component of ABC transporter.
 
     0.789
ADY12333.1
KEGG: rec:RHECIAT_PC0000512 hypothetical protein.
 
     0.784
ADY12685.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: rec:RHECIAT_PC0000519 putative sugar ABC transporter, substrate-binding protein.
 
    0.783
ADY12682.1
KEGG: csh:Closa_1714 heparinase II/III family protein.
 
     0.769
ADY13114.1
KEGG: eel:EUBELI_01110 gluconate 5-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR.
 
   
 0.756
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.712
ADY12690.1
Hypothetical protein.
       0.576
ADY12683.1
KEGG: csh:Closa_1924 two component transcriptional regulator, AraC family; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain.
 
    0.564
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.