STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (294 aa)    
Predicted Functional Partners:
deoC-2
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
 0.966
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
 0.928
ADY13849.1
TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: ssm:Spirs_0557 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family.
  
 0.924
ADY12540.1
KEGG: cpo:COPRO5265_0387 putative transketolase.
  
 0.920
ADY14474.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 0.920
ADY13907.1
KEGG: ssm:Spirs_2662 sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: Ribose/galactose isomerase; PFAM: Ribose/galactose isomerase.
  
 
 0.912
ADY14087.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: amr:AM1_6263 ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; PFAM: Ribose/galactose isomerase.
  
 
 0.912
ADY13815.1
PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; KEGG: sta:STHERM_c11950 hypothetical protein.
   
 
 0.904
ADY11897.1
Transketolase; KEGG: cbt:CLH_3107 transketolase, thiamine diphosphate binding domain; PFAM: Transketolase, N-terminal.
    
  0.902
ADY11898.1
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: tjr:TherJR_2764 transketolase central region; SMART: Transketolase-like, pyrimidine-binding domain.
    
  0.902
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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