Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADY12928.1 | ADY12929.1 | SpiBuddy_1103 | SpiBuddy_1104 | Hypothetical protein. | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.580 |
ADY12928.1 | ADY12930.1 | SpiBuddy_1103 | SpiBuddy_1105 | Hypothetical protein. | Hypothetical protein. | 0.580 |
ADY12928.1 | ADY12931.1 | SpiBuddy_1103 | SpiBuddy_1106 | Hypothetical protein. | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ipo:Ilyop_0501 diguanylate cyclase; SMART: Diguanylate cyclase, predicted. | 0.421 |
ADY12928.1 | purU | SpiBuddy_1103 | SpiBuddy_1100 | Hypothetical protein. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.762 |
ADY12928.1 | xseA | SpiBuddy_1103 | SpiBuddy_1102 | Hypothetical protein. | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.773 |
ADY12928.1 | xseB | SpiBuddy_1103 | SpiBuddy_1101 | Hypothetical protein. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.773 |
ADY12929.1 | ADY12928.1 | SpiBuddy_1104 | SpiBuddy_1103 | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Hypothetical protein. | 0.580 |
ADY12929.1 | ADY12930.1 | SpiBuddy_1104 | SpiBuddy_1105 | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Hypothetical protein. | 0.773 |
ADY12929.1 | ADY12931.1 | SpiBuddy_1104 | SpiBuddy_1106 | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ipo:Ilyop_0501 diguanylate cyclase; SMART: Diguanylate cyclase, predicted. | 0.546 |
ADY12929.1 | purU | SpiBuddy_1104 | SpiBuddy_1100 | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.572 |
ADY12929.1 | xseA | SpiBuddy_1104 | SpiBuddy_1102 | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.580 |
ADY12929.1 | xseB | SpiBuddy_1104 | SpiBuddy_1101 | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.592 |
ADY12930.1 | ADY12928.1 | SpiBuddy_1105 | SpiBuddy_1103 | Hypothetical protein. | Hypothetical protein. | 0.580 |
ADY12930.1 | ADY12929.1 | SpiBuddy_1105 | SpiBuddy_1104 | Hypothetical protein. | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.773 |
ADY12930.1 | ADY12931.1 | SpiBuddy_1105 | SpiBuddy_1106 | Hypothetical protein. | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ipo:Ilyop_0501 diguanylate cyclase; SMART: Diguanylate cyclase, predicted. | 0.546 |
ADY12930.1 | purU | SpiBuddy_1105 | SpiBuddy_1100 | Hypothetical protein. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.572 |
ADY12930.1 | xseA | SpiBuddy_1105 | SpiBuddy_1102 | Hypothetical protein. | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.580 |
ADY12930.1 | xseB | SpiBuddy_1105 | SpiBuddy_1101 | Hypothetical protein. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.580 |
ADY12931.1 | ADY12928.1 | SpiBuddy_1106 | SpiBuddy_1103 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ipo:Ilyop_0501 diguanylate cyclase; SMART: Diguanylate cyclase, predicted. | Hypothetical protein. | 0.421 |
ADY12931.1 | ADY12929.1 | SpiBuddy_1106 | SpiBuddy_1104 | TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ipo:Ilyop_0501 diguanylate cyclase; SMART: Diguanylate cyclase, predicted. | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.546 |
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