STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY13093.1KEGG: ssm:Spirs_1553 tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; Belongs to the 'phage' integrase family. (300 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.825
hslV
ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.784
ADY13096.1
KEGG: gur:Gura_4012 tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; Belongs to the 'phage' integrase family.
 
   
0.783
ADY13094.1
PFAM: Protein of unknown function DUF81; KEGG: cbt:CLH_3273 transporter.
       0.773
hslU
ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
  
  
 0.752
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
  
 0.739
ADY13089.1
PFAM: Cell cycle protein; KEGG: slp:Slip_0794 cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.728
ADY13095.1
SMF family protein; PFAM: DNA recombination-mediator protein A; KEGG: tde:TDE1207 DNA processing protein DprA, putative.
     
 0.718
ADY13088.1
PFAM: Glycosyl transferase, family 4; KEGG: amt:Amet_2882 phospho-N-acetylmuramoyl-pentapeptide-transferase.
 
    0.712
mraZ
TIGRFAM: MraZ; HAMAP: MraZ; KEGG: ssm:Spirs_1544 MraZ protein; PFAM: MraZ domain; Belongs to the MraZ family.
 
   
 0.700
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.