STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY13276.1KEGG: ssm:Spirs_2460 hypothetical protein. (177 aa)    
Predicted Functional Partners:
ADY13277.1
KEGG: tde:TDE1381 V-type ATP synthase subunit E.
       0.808
ADY13272.1
PFAM: ATPase, V0/A0 complex, 116kDa subunit; KEGG: ssm:Spirs_2456 V-type ATPase 116 kDa subunit.
       0.794
ADY13273.1
KEGG: ssm:Spirs_2457 V-type ATPase, D subunit; TIGRFAM: ATPase, V1/A1 complex, subunit D; PFAM: ATPase, V1/A1 complex, subunit D.
       0.794
atpB-2
V-type ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
       0.794
atpA-2
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.785
ADY13271.1
KEGG: ssm:Spirs_2455 V-type ATP synthase subunit K.
       0.711
ADY13278.1
Hypothetical protein.
       0.453
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.