STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14016.1KEGG: sta:STHERM_c21200 hypothetical protein. (279 aa)    
Predicted Functional Partners:
ADY14017.1
PFAM: DNA helicase, UvrD/REP type; KEGG: ssm:Spirs_3757 UvrD/REP helicase.
       0.792
rimO
Ribosomal protein S12 methylthiotransferase rimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.785
ADY13165.1
PFAM: Glycoside hydrolase, family 57, N-terminal; KEGG: ssm:Spirs_1915 4-alpha-glucanotransferase.
  
     0.757
ADY14137.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ssm:Spirs_3694 endonuclease/exonuclease/phosphatase.
 
     0.720
ADY14061.1
KEGG: ssm:Spirs_3945 hypothetical protein.
  
     0.715
ADY13849.1
TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: ssm:Spirs_0557 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
  
 0.690
ADY11874.1
KEGG: ssm:Spirs_0263 transporter, putative; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.676
ADY13719.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: ssm:Spirs_2596 tetratricopeptide TPR_2 repeat protein.
 
     0.671
ADY13821.1
KEGG: ssm:Spirs_3959 hypothetical protein.
  
     0.670
ADY14726.1
PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: ssm:Spirs_1328 molybdopterin dehydrogenase FAD-binding protein.
  
     0.660
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.