STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14085.1Transketolase; KEGG: kol:Kole_0993 transketolase domain protein; PFAM: Transketolase, N-terminal. (273 aa)    
Predicted Functional Partners:
ADY14086.1
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: ssm:Spirs_2991 transketolase domain protein; SMART: Transketolase-like, pyrimidine-binding domain.
 
 0.998
ADY13207.1
PFAM: Ribulose-phosphate 3-epimerase; manually curated; KEGG: tde:TDE2597 ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 0.994
ADY11898.1
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: tjr:TherJR_2764 transketolase central region; SMART: Transketolase-like, pyrimidine-binding domain.
 
 0.991
ADY12348.1
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: gme:Gmet_0552 transketolase subunit B; SMART: Transketolase-like, pyrimidine-binding domain.
 
 0.991
ADY14776.1
1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: ttm:Tthe_1907 transketolase central region; SMART: Transketolase-like, pyrimidine-binding domain.
 
 0.991
ADY14087.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: amr:AM1_6263 ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; PFAM: Ribose/galactose isomerase.
  
 
 0.919
ADY13849.1
TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: ssm:Spirs_0557 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family.
    
  0.905
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
  0.902
ADY13815.1
PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; KEGG: sta:STHERM_c11950 hypothetical protein.
 
   
  0.900
ADY14235.1
PFAM: Sugar isomerase (SIS); KEGG: gmc:GY4MC1_3094 6-phospho 3-hexuloisomerase.
     
  0.900
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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