STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14503.1PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: srt:Srot_1727 glyoxalase/bleomycin resistance protein/dioxygenase. (150 aa)    
Predicted Functional Partners:
ADY14504.1
PFAM: SAF domain; KEGG: rru:Rru_A3141 homoserine dehydrogenase, NAD-binding.
       0.773
ADY11909.1
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: mta:Moth_0064 pyruvate:ferredoxin (flavodoxin) oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain.
  
  
 0.586
ADY14505.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ssm:Spirs_1256 protein of unknown function DUF112 transmembrane.
       0.554
ADY14506.1
KEGG: ssm:Spirs_1257 hypothetical protein.
       0.524
ADY13005.1
PFAM: Domain of unknown function DUF362; 4Fe-4S binding domain; KEGG: toc:Toce_1178 hypothetical protein.
  
  
 0.422
ADY14507.1
KEGG: ssm:Spirs_1258 hypothetical protein.
       0.413
ADY13642.1
TIGRFAM: Putative selenate reductase YgfK; KEGG: ssm:Spirs_1386 selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.408
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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