STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14506.1KEGG: ssm:Spirs_1257 hypothetical protein. (153 aa)    
Predicted Functional Partners:
ADY12542.1
KEGG: oih:OB2839 hypothetical protein.
     
  0.900
ADY13182.1
Hypothetical protein; KEGG: ect:ECIAI39_3169 putative permease subunit.
     
  0.900
ADY13544.1
KEGG: dhd:Dhaf_2074 hypothetical protein.
     
  0.900
ADY14505.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ssm:Spirs_1256 protein of unknown function DUF112 transmembrane.
       0.729
ADY14507.1
KEGG: ssm:Spirs_1258 hypothetical protein.
       0.592
ADY14503.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: srt:Srot_1727 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.524
ADY14504.1
PFAM: SAF domain; KEGG: rru:Rru_A3141 homoserine dehydrogenase, NAD-binding.
       0.524
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.