STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14710.1PFAM: Protein of unknown function DUF1653; KEGG: lpp:plpp0071 hypothetical protein. (74 aa)    
Predicted Functional Partners:
ADY14712.1
LemA family protein; PFAM: LemA; KEGG: elm:ELI_0701 hypothetical protein.
       0.775
ADY14711.1
PFAM: Protein of unknown function DUF2207, membrane; KEGG: ipo:Ilyop_0755 protein of unknown function DUF2207, membrane.
       0.773
argR
Arginine repressor, ArgR; Regulates arginine biosynthesis genes.
       0.516
ADY13463.1
PFAM: Phospholipid/glycerol acyltransferase; KEGG: ssm:Spirs_2368 acyltransferase.
  
     0.400
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.