STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14743.1PFAM: PspA/IM30; KEGG: dvm:DvMF_1799 phage shock protein A, PspA. (217 aa)    
Predicted Functional Partners:
ADY14745.1
Phage shock protein C, PspC; PFAM: Phage shock domain; KEGG: dbr:Deba_2761 phage shock protein C, PspC.
 
 
 0.986
ADY14741.1
Hypothetical protein.
  
 
 0.876
ADY14746.1
Hypothetical protein; KEGG: bld:BLi03495 YvqG.
  
  
 0.840
ADY14363.1
Hpt sensor hybrid histidine kinase; KEGG: cst:CLOST_1047 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Extracellular solute-binding protein, family 3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Extracellular solute-binding protein, family 3; Signal transduction response regulator, rec [...]
    
 
 0.769
ADY14744.1
Hypothetical protein.
       0.737
ADY14742.1
KEGG: dbr:Deba_2764 sigma54 specific transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core.
 
 
 
 0.698
ADY14392.1
TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dsa:Desal_0288 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS.
  
 
 0.546
ADY14747.1
PFAM: Protein of unknown function DUF1576; KEGG: nth:Nther_0317 protein of unknown function DUF1576.
       0.499
ADY14748.1
Hypothetical protein.
       0.499
ADY12868.1
TIGRFAM: PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; KEGG: ipo:Ilyop_2210 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; PAS.
   
 
 0.411
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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