STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY14846.1KEGG: ssm:Spirs_0085 hypothetical protein. (474 aa)    
Predicted Functional Partners:
ADY13894.1
PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; KEGG: ssm:Spirs_2289 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
  
  
 0.804
ADY14845.1
Manually curated; PFAM: Heat shock protein DnaJ, N-terminal; KEGG: dat:HRM2_24840 DjlA; SMART: Heat shock protein DnaJ, N-terminal.
       0.776
ADY13253.1
KEGG: ssm:Spirs_2435 phosphoribosyl transferase domain protein.
  
     0.775
ADY13719.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: ssm:Spirs_2596 tetratricopeptide TPR_2 repeat protein.
  
     0.772
ADY13296.1
KEGG: ssm:Spirs_1527 phosphoribosyl transferase domain-containing protein.
  
     0.768
ADY14834.1
PFAM: Thymidine kinase; KEGG: ssm:Spirs_0100 thymidine kinase; Belongs to the thymidine kinase family.
  
     0.768
ADY13258.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.766
cmk-2
KEGG: ssm:Spirs_2280 cytidylate kinase; TIGRFAM: Cytidylate kinase, putative; PFAM: Cytidylate kinase domain.
  
     0.765
ADY13888.1
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
     0.763
ADY13123.1
SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; KEGG: ssm:Spirs_1866 PUR-alpha/beta/gamma DNA/RNA-binding protein.
  
     0.758
Your Current Organism:
Sphaerochaeta globosa
NCBI taxonomy Id: 158189
Other names: S. globosa str. Buddy, Sphaerochaeta globosa str. Buddy, Sphaerochaeta sp. Buddy, Spirochaeta sp. Buddy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.