STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV28420.1ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (423 aa)    
Predicted Functional Partners:
AEV28421.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.990
AEV28422.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.986
AEV28415.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  0.933
AEV28098.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.809
AEV28097.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.778
AEV28424.1
PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
 
     0.743
AEV28419.1
PFAM: Bacterial regulatory proteins, lacI family; family.
       0.737
AEV28423.1
PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
 
     0.708
AEV29196.1
Alpha-galactosidase; PFAM: Melibiase.
 
  
 0.511
AEV29597.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.478
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.