STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV28634.1PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (371 aa)    
Predicted Functional Partners:
AEV29640.1
PFAM: EAL domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.853
AEV30814.1
PFAM: 5TMR of 5TMR-LYT; HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.834
AEV28639.1
EAL domain-containing protein; PFAM: EAL domain; GGDEF domain.
 
  
 0.806
AEV28716.1
PFAM: EAL domain; PAS fold; TIGRFAM: PAS domain S-box.
 
  
 0.806
AEV28884.1
EAL domain-containing protein; PFAM: EAL domain; GGDEF domain.
 
  
 0.806
AEV30012.1
EAL domain-containing protein; PFAM: EAL domain.
 
  
 0.803
AEV30039.1
PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 
 0.792
AEV28040.1
PFAM: HD domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.787
AEV30140.1
PFAM: HD domain; Response regulator receiver domain.
 
    0.593
AEV27936.1
PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; Hpt domain.
 
  
 0.577
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.