STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV28811.1PFAM: HNH endonuclease. (185 aa)    
Predicted Functional Partners:
AEV28810.1
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein.
       0.739
AEV28813.1
NTP pyrophosphohydrolase; PFAM: NUDIX domain.
       0.537
AEV28812.1
Hypothetical protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain.
       0.530
AEV28809.1
PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family.
       0.473
AEV28807.1
PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain.
       0.459
AEV28808.1
HipA domain-containing protein; TIGRFAM: HipA N-terminal domain.
       0.459
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.