Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEV28089.1 | AEV28648.1 | SpiGrapes_0226 | SpiGrapes_0820 | Hypothetical protein; PFAM: FMN-binding domain. | Major membrane immunogen, membrane-anchored lipoprotein. | 0.414 |
AEV28089.1 | AEV28823.1 | SpiGrapes_0226 | SpiGrapes_0998 | Hypothetical protein; PFAM: FMN-binding domain. | Hypothetical protein; PFAM: FMN-binding domain. | 0.770 |
AEV28089.1 | AEV30144.1 | SpiGrapes_0226 | SpiGrapes_2372 | Hypothetical protein; PFAM: FMN-binding domain. | Hypothetical protein. | 0.685 |
AEV28244.1 | AEV28823.1 | SpiGrapes_0386 | SpiGrapes_0998 | Phytoene dehydrogenase-like oxidoreductase; PFAM: FAD dependent oxidoreductase. | Hypothetical protein; PFAM: FMN-binding domain. | 0.472 |
AEV28244.1 | AEV30144.1 | SpiGrapes_0386 | SpiGrapes_2372 | Phytoene dehydrogenase-like oxidoreductase; PFAM: FAD dependent oxidoreductase. | Hypothetical protein. | 0.428 |
AEV28648.1 | AEV28089.1 | SpiGrapes_0820 | SpiGrapes_0226 | Major membrane immunogen, membrane-anchored lipoprotein. | Hypothetical protein; PFAM: FMN-binding domain. | 0.414 |
AEV28648.1 | AEV28823.1 | SpiGrapes_0820 | SpiGrapes_0998 | Major membrane immunogen, membrane-anchored lipoprotein. | Hypothetical protein; PFAM: FMN-binding domain. | 0.537 |
AEV28648.1 | AEV30830.1 | SpiGrapes_0820 | SpiGrapes_3083 | Major membrane immunogen, membrane-anchored lipoprotein. | Hypothetical protein. | 0.695 |
AEV28648.1 | AEV30831.1 | SpiGrapes_0820 | SpiGrapes_3084 | Major membrane immunogen, membrane-anchored lipoprotein. | Hypothetical protein. | 0.653 |
AEV28648.1 | AEV30833.1 | SpiGrapes_0820 | SpiGrapes_3086 | Major membrane immunogen, membrane-anchored lipoprotein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.599 |
AEV28821.1 | AEV28822.1 | SpiGrapes_0996 | SpiGrapes_0997 | Hypothetical protein. | Membrane-associated lipoprotein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.586 |
AEV28821.1 | AEV28823.1 | SpiGrapes_0996 | SpiGrapes_0998 | Hypothetical protein. | Hypothetical protein; PFAM: FMN-binding domain. | 0.586 |
AEV28822.1 | AEV28821.1 | SpiGrapes_0997 | SpiGrapes_0996 | Membrane-associated lipoprotein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Hypothetical protein. | 0.586 |
AEV28822.1 | AEV28823.1 | SpiGrapes_0997 | SpiGrapes_0998 | Membrane-associated lipoprotein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Hypothetical protein; PFAM: FMN-binding domain. | 0.807 |
AEV28823.1 | AEV28089.1 | SpiGrapes_0998 | SpiGrapes_0226 | Hypothetical protein; PFAM: FMN-binding domain. | Hypothetical protein; PFAM: FMN-binding domain. | 0.770 |
AEV28823.1 | AEV28244.1 | SpiGrapes_0998 | SpiGrapes_0386 | Hypothetical protein; PFAM: FMN-binding domain. | Phytoene dehydrogenase-like oxidoreductase; PFAM: FAD dependent oxidoreductase. | 0.472 |
AEV28823.1 | AEV28648.1 | SpiGrapes_0998 | SpiGrapes_0820 | Hypothetical protein; PFAM: FMN-binding domain. | Major membrane immunogen, membrane-anchored lipoprotein. | 0.537 |
AEV28823.1 | AEV28821.1 | SpiGrapes_0998 | SpiGrapes_0996 | Hypothetical protein; PFAM: FMN-binding domain. | Hypothetical protein. | 0.586 |
AEV28823.1 | AEV28822.1 | SpiGrapes_0998 | SpiGrapes_0997 | Hypothetical protein; PFAM: FMN-binding domain. | Membrane-associated lipoprotein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.807 |
AEV28823.1 | AEV29564.1 | SpiGrapes_0998 | SpiGrapes_1767 | Hypothetical protein; PFAM: FMN-binding domain. | PFAM: Ketopantoate reductase PanE/ApbA; TIGRFAM: 2-dehydropantoate 2-reductase. | 0.499 |
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