STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV28990.1ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein. (257 aa)    
Predicted Functional Partners:
AEV28991.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.957
AEV30722.1
Hypothetical protein; PFAM: BioY family.
 
 0.957
AEV28989.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1393).
 
 
 0.951
AEV30432.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.915
AEV28992.1
PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
    0.787
AEV28994.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
  
    0.774
AEV28993.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
     
 0.772
AEV28952.1
ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter; ATP-binding cassette cobalt transporter; Cobalt transport protein.
 
 
 0.705
AEV28298.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
  
 
 0.639
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
       0.598
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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