STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV29425.1Hypothetical protein. (1073 aa)    
Predicted Functional Partners:
AEV29423.1
Hypothetical protein.
 
 
0.689
AEV28750.1
Hypothetical protein.
  
  
 0.669
AEV29427.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
 
     0.648
AEV29424.1
Hypothetical protein.
 
     0.643
AEV30685.1
Hypothetical protein.
 
  
 0.605
AEV29324.1
Hypothetical protein.
 
  
0.577
AEV27936.1
PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; Hpt domain.
  
  
 0.562
AEV29426.1
PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.560
AEV29342.1
PFAM: FAD binding domain.
 
   
 0.547
AEV29428.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
     0.539
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.