Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEV28290.1 | AEV28671.1 | SpiGrapes_0432 | SpiGrapes_0844 | Hypothetical protein. | Hypothetical protein. | 0.463 |
AEV28290.1 | AEV29586.1 | SpiGrapes_0432 | SpiGrapes_1790 | Hypothetical protein. | Acetyltransferase; PFAM: FR47-like protein. | 0.452 |
AEV28505.1 | AEV29586.1 | SpiGrapes_0663 | SpiGrapes_1790 | Hypothetical protein. | Acetyltransferase; PFAM: FR47-like protein. | 0.459 |
AEV28671.1 | AEV28290.1 | SpiGrapes_0844 | SpiGrapes_0432 | Hypothetical protein. | Hypothetical protein. | 0.463 |
AEV28671.1 | AEV29586.1 | SpiGrapes_0844 | SpiGrapes_1790 | Hypothetical protein. | Acetyltransferase; PFAM: FR47-like protein. | 0.510 |
AEV29581.1 | AEV29586.1 | SpiGrapes_1785 | SpiGrapes_1790 | PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). | Acetyltransferase; PFAM: FR47-like protein. | 0.444 |
AEV29581.1 | argB | SpiGrapes_1785 | SpiGrapes_1787 | PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.610 |
AEV29581.1 | argC | SpiGrapes_1785 | SpiGrapes_1789 | PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). | N-acetyl-gamma-glutamyl-phosphate reductase, common form; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.584 |
AEV29581.1 | argD | SpiGrapes_1785 | SpiGrapes_1786 | PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). | PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.648 |
AEV29581.1 | argJ | SpiGrapes_1785 | SpiGrapes_1788 | PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). | Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.616 |
AEV29586.1 | AEV28290.1 | SpiGrapes_1790 | SpiGrapes_0432 | Acetyltransferase; PFAM: FR47-like protein. | Hypothetical protein. | 0.452 |
AEV29586.1 | AEV28505.1 | SpiGrapes_1790 | SpiGrapes_0663 | Acetyltransferase; PFAM: FR47-like protein. | Hypothetical protein. | 0.459 |
AEV29586.1 | AEV28671.1 | SpiGrapes_1790 | SpiGrapes_0844 | Acetyltransferase; PFAM: FR47-like protein. | Hypothetical protein. | 0.510 |
AEV29586.1 | AEV29581.1 | SpiGrapes_1790 | SpiGrapes_1785 | Acetyltransferase; PFAM: FR47-like protein. | PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). | 0.444 |
AEV29586.1 | AEV29587.1 | SpiGrapes_1790 | SpiGrapes_1791 | Acetyltransferase; PFAM: FR47-like protein. | Cytidylate kinase. | 0.735 |
AEV29586.1 | argB | SpiGrapes_1790 | SpiGrapes_1787 | Acetyltransferase; PFAM: FR47-like protein. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.561 |
AEV29586.1 | argC | SpiGrapes_1790 | SpiGrapes_1789 | Acetyltransferase; PFAM: FR47-like protein. | N-acetyl-gamma-glutamyl-phosphate reductase, common form; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.558 |
AEV29586.1 | argD | SpiGrapes_1790 | SpiGrapes_1786 | Acetyltransferase; PFAM: FR47-like protein. | PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.568 |
AEV29586.1 | argJ | SpiGrapes_1790 | SpiGrapes_1788 | Acetyltransferase; PFAM: FR47-like protein. | Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.570 |
AEV29586.1 | trmD | SpiGrapes_1790 | SpiGrapes_0496 | Acetyltransferase; PFAM: FR47-like protein. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.569 |
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