STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV29766.1PFAM: Mannitol dehydrogenase Rossmann domain. (134 aa)    
Predicted Functional Partners:
AEV29765.1
Altronate dehydratase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus.
 
 
 0.948
uxaC
PFAM: Glucuronate isomerase.
 
 
 0.874
AEV29767.1
Putative Na+-dependent transporter; PFAM: Sodium Bile acid symporter family.
      0.765
AEV28393.1
PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase.
 
  
 0.604
AEV29512.1
PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase.
 
  
 0.585
AEV29772.1
Putative unsaturated glucuronyl hydrolase; PFAM: Glycosyl Hydrolase Family 88.
 
    0.569
AEV29768.1
PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
  
 0.529
AEV29763.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
  
    0.481
AEV29745.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
 
     0.407
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.