STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV29784.1PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (249 aa)    
Predicted Functional Partners:
AEV29783.1
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter.
 
     0.661
AEV29782.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase.
 
     0.621
AEV29629.1
Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
  
     0.597
AEV30797.1
Hypothetical protein; PFAM: Caspase domain.
  
    0.573
AEV30685.1
Hypothetical protein.
  
    0.572
AEV29147.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.541
AEV29628.1
Hypothetical protein.
  
    0.516
AEV30749.1
Hypothetical protein.
  
     0.507
AEV30748.1
Hypothetical protein.
  
     0.483
AEV30708.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
  
     0.475
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.