STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV29954.1Hypothetical protein. (588 aa)    
Predicted Functional Partners:
AEV29944.1
Hypothetical protein.
 
     0.793
AEV30334.1
PFAM: Domain of unknown function DUF83.
  
     0.774
AEV27999.1
Hypothetical protein.
  
     0.773
AEV28449.1
Hypothetical protein.
  
     0.773
AEV28582.1
PFAM: Gram-negative pili assembly chaperone, N-terminal domain.
  
     0.773
AEV30749.1
Hypothetical protein.
  
     0.773
AEV30685.1
Hypothetical protein.
  
     0.770
AEV28320.1
Alpha-amylase/alpha-mannosidase; PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF1926).
  
     0.769
AEV30377.1
PFAM: Aminotransferase class-III; manually curated.
  
     0.769
AEV30797.1
Hypothetical protein; PFAM: Caspase domain.
  
     0.769
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.