STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV29991.1ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease. (411 aa)    
Predicted Functional Partners:
AEV29993.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.963
AEV29990.1
Hypothetical protein.
 
 
 
 0.957
AEV30665.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.833
AEV29992.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
    
0.826
AEV29989.1
Hypothetical protein.
       0.784
AEV29995.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
  
  
 0.778
AEV29994.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
       0.772
AEV29021.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.770
AEV28314.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.725
AEV30668.1
Hypothetical protein.
 
 
 
 0.720
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.