STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV30012.1EAL domain-containing protein; PFAM: EAL domain. (491 aa)    
Predicted Functional Partners:
AEV30039.1
PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 0.842
AEV28669.1
Diguanylate cyclase; PFAM: HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG; diguanylate cyclase (GGDEF) domain.
 
 
 0.839
AEV30110.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.838
AEV30814.1
PFAM: 5TMR of 5TMR-LYT; HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.837
AEV29601.1
PFAM: 5TMR of 5TMR-LYT; HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.831
AEV29346.1
PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.830
AEV30169.1
PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.808
AEV28078.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.805
AEV30044.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.805
AEV28590.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.804
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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