STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV30601.1DNA/RNA helicase, superfamily II, SNF2 family; PFAM: SNF2 family N-terminal domain. (457 aa)    
Predicted Functional Partners:
AEV30602.1
VRR-NUC domain-containing protein; PFAM: VRR-NUC domain.
 
     0.949
AEV30599.1
PFAM: Protein of unknown function (DUF1492).
 
    0.927
AEV30603.1
Putative P-loop ATPase; PFAM: Virulence-associated protein E.
 
     0.861
AEV30607.1
PFAM: DNA polymerase family A.
 
 
 0.804
AEV30608.1
PFAM: Protein of unknown function (DUF2815).
 
     0.784
AEV30609.1
PFAM: Protein of unknown function (DUF2800).
 
     0.784
AEV30610.1
Hypothetical protein.
 
    0.777
AEV30600.1
Hypothetical protein.
       0.773
AEV30976.1
Hypothetical protein.
   
 0.756
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.755
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.