Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEV28290.1 | AEV30171.1 | SpiGrapes_0432 | SpiGrapes_2400 | Hypothetical protein. | Putative transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding; Bacterial transcription activator, effector binding domain. | 0.429 |
AEV28290.1 | AEV30830.1 | SpiGrapes_0432 | SpiGrapes_3083 | Hypothetical protein. | Hypothetical protein. | 0.505 |
AEV28290.1 | AEV30831.1 | SpiGrapes_0432 | SpiGrapes_3084 | Hypothetical protein. | Hypothetical protein. | 0.446 |
AEV28290.1 | AEV30833.1 | SpiGrapes_0432 | SpiGrapes_3086 | Hypothetical protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.572 |
AEV28648.1 | AEV29580.1 | SpiGrapes_0820 | SpiGrapes_1784 | Major membrane immunogen, membrane-anchored lipoprotein. | Transcriptional regulator. | 0.461 |
AEV28648.1 | AEV30830.1 | SpiGrapes_0820 | SpiGrapes_3083 | Major membrane immunogen, membrane-anchored lipoprotein. | Hypothetical protein. | 0.695 |
AEV28648.1 | AEV30831.1 | SpiGrapes_0820 | SpiGrapes_3084 | Major membrane immunogen, membrane-anchored lipoprotein. | Hypothetical protein. | 0.653 |
AEV28648.1 | AEV30833.1 | SpiGrapes_0820 | SpiGrapes_3086 | Major membrane immunogen, membrane-anchored lipoprotein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.599 |
AEV29474.1 | AEV30171.1 | SpiGrapes_1671 | SpiGrapes_2400 | Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. | Putative transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding; Bacterial transcription activator, effector binding domain. | 0.471 |
AEV29474.1 | AEV30830.1 | SpiGrapes_1671 | SpiGrapes_3083 | Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. | Hypothetical protein. | 0.579 |
AEV29474.1 | AEV30831.1 | SpiGrapes_1671 | SpiGrapes_3084 | Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. | Hypothetical protein. | 0.601 |
AEV29474.1 | AEV30832.1 | SpiGrapes_1671 | SpiGrapes_3085 | Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. | ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. | 0.405 |
AEV29474.1 | AEV30833.1 | SpiGrapes_1671 | SpiGrapes_3086 | Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. | PFAM: Bacterial regulatory proteins, tetR family. | 0.553 |
AEV29580.1 | AEV28648.1 | SpiGrapes_1784 | SpiGrapes_0820 | Transcriptional regulator. | Major membrane immunogen, membrane-anchored lipoprotein. | 0.461 |
AEV29580.1 | AEV30171.1 | SpiGrapes_1784 | SpiGrapes_2400 | Transcriptional regulator. | Putative transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding; Bacterial transcription activator, effector binding domain. | 0.690 |
AEV29580.1 | AEV30830.1 | SpiGrapes_1784 | SpiGrapes_3083 | Transcriptional regulator. | Hypothetical protein. | 0.620 |
AEV29580.1 | AEV30831.1 | SpiGrapes_1784 | SpiGrapes_3084 | Transcriptional regulator. | Hypothetical protein. | 0.623 |
AEV29580.1 | AEV30832.1 | SpiGrapes_1784 | SpiGrapes_3085 | Transcriptional regulator. | ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. | 0.426 |
AEV29580.1 | AEV30833.1 | SpiGrapes_1784 | SpiGrapes_3086 | Transcriptional regulator. | PFAM: Bacterial regulatory proteins, tetR family. | 0.644 |
AEV30171.1 | AEV28290.1 | SpiGrapes_2400 | SpiGrapes_0432 | Putative transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding; Bacterial transcription activator, effector binding domain. | Hypothetical protein. | 0.429 |
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