STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLI75732.1Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)    
Predicted Functional Partners:
KLI75698.1
Rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.959
fucI
Sugar isomerase; Catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.950
KLI75734.1
Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.891
KLI75697.1
L-rhamnose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.890
KLI75733.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.791
KLI75699.1
Rhamnulose-1-phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.712
KLI76798.1
Rhamnulose-1-phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.694
KLI75188.1
Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.547
KLI75649.1
Transaldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.542
ptsH
Phosphocarrier protein HPr; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain.
   
 
 0.525
Your Current Organism:
Lactobacillus casei
NCBI taxonomy Id: 1582
Other names: ATCC 393, BCRC 10697, Bacillus a, Bacillus casei a, Bacterium casei a, CCRC 10697, CCRC:10697, CECT 475, CIP 103137, Caseobacterium vulgare, DSM 20011, IAM 12473, IFO 15883, KCTC 3109, L. casei, LMG 6904, LMG:6904, Lactobacillus casei subsp. casei, Lactobacillus sp. NCIM 2363, Lactobacillus sp. NCIM 2732, Lactobacillus sp. T2, Lactobacillus sp. T20, Lactobacterium casei, NBRC 15883, NCDO 161, NCIMB 11970, NCTC 13641, Streptobacterium casei, strain Hucker03, strain Orla-Jensen 7, strain OrlandL-323, strain Tittsler303
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