Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN23944.1 | KRN23947.1 | IV69_GL000956 | IV69_GL000959 | Hypothetical protein. | Diacylglycerol kinase. | 0.408 |
KRN23944.1 | KRN23949.1 | IV69_GL000956 | IV69_GL000961 | Hypothetical protein. | Phosphate starvation-inducible protein PhoH, ATPase. | 0.408 |
KRN23944.1 | era | IV69_GL000956 | IV69_GL000958 | Hypothetical protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.500 |
KRN23944.1 | recO | IV69_GL000956 | IV69_GL000957 | Hypothetical protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.610 |
KRN23944.1 | ybeY | IV69_GL000956 | IV69_GL000960 | Hypothetical protein. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.408 |
KRN23947.1 | KRN23944.1 | IV69_GL000959 | IV69_GL000956 | Diacylglycerol kinase. | Hypothetical protein. | 0.408 |
KRN23947.1 | KRN23949.1 | IV69_GL000959 | IV69_GL000961 | Diacylglycerol kinase. | Phosphate starvation-inducible protein PhoH, ATPase. | 0.839 |
KRN23947.1 | KRN23950.1 | IV69_GL000959 | IV69_GL000962 | Diacylglycerol kinase. | Hypothetical protein. | 0.579 |
KRN23947.1 | era | IV69_GL000959 | IV69_GL000958 | Diacylglycerol kinase. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.801 |
KRN23947.1 | recO | IV69_GL000959 | IV69_GL000957 | Diacylglycerol kinase. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.681 |
KRN23947.1 | rpsU | IV69_GL000959 | IV69_GL000963 | Diacylglycerol kinase. | Hypothetical protein; Belongs to the bacterial ribosomal protein bS21 family. | 0.455 |
KRN23947.1 | ybeY | IV69_GL000959 | IV69_GL000960 | Diacylglycerol kinase. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.955 |
KRN23949.1 | KRN23944.1 | IV69_GL000961 | IV69_GL000956 | Phosphate starvation-inducible protein PhoH, ATPase. | Hypothetical protein. | 0.408 |
KRN23949.1 | KRN23947.1 | IV69_GL000961 | IV69_GL000959 | Phosphate starvation-inducible protein PhoH, ATPase. | Diacylglycerol kinase. | 0.839 |
KRN23949.1 | KRN23950.1 | IV69_GL000961 | IV69_GL000962 | Phosphate starvation-inducible protein PhoH, ATPase. | Hypothetical protein. | 0.579 |
KRN23949.1 | KRN24030.1 | IV69_GL000961 | IV69_GL001046 | Phosphate starvation-inducible protein PhoH, ATPase. | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.459 |
KRN23949.1 | cmk | IV69_GL000961 | IV69_GL001595 | Phosphate starvation-inducible protein PhoH, ATPase. | Cytidylate kinase. | 0.449 |
KRN23949.1 | era | IV69_GL000961 | IV69_GL000958 | Phosphate starvation-inducible protein PhoH, ATPase. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.842 |
KRN23949.1 | recO | IV69_GL000961 | IV69_GL000957 | Phosphate starvation-inducible protein PhoH, ATPase. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.863 |
KRN23949.1 | rpsU | IV69_GL000961 | IV69_GL000963 | Phosphate starvation-inducible protein PhoH, ATPase. | Hypothetical protein; Belongs to the bacterial ribosomal protein bS21 family. | 0.466 |
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