Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRN24041.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
KRN24042.1
ComG operon protein 2.
 
  
 0.996
KRN24043.1
ComG operon protein 1.
 
  
 0.995
KRN23373.1
Superfamily II DNA RNA helicase.
 
  
 0.872
KRN22072.1
Competence protein CelA.
   
  
 0.841
KRN22071.1
Metallo-beta-lactamase superfamily hydrolase.
   
  
 0.806
DprA
DNA protecting protein DprA.
   
  
 0.572
KRN23207.1
Hypothetical protein.
  
     0.510
KRN23978.1
Competence protein.
  
  
 0.493
KRN21956.1
dCMP deaminase.
   
  
 0.485
dinG
Helicase; 3'-5' exonuclease.
      
 0.447
Your Current Organism:
Weissella confusa
NCBI taxonomy Id: 1583
Other names: ATCC 10881, BCRC 14002, CCRC 14002, CCRC:14002, CCUG 30113, CIP 103172, CIP 54.169, DSM 20196, LMG 9497, LMG:9497, Lactobacillus confusa (sic), Lactobacillus confusus, Lactobacillus coprophilus subsp. confusus, NCIMB 9311, W. confusa, strain TCC 10881
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