STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN24043.1ComG operon protein 1. (274 aa)    
Predicted Functional Partners:
KRN24042.1
ComG operon protein 2.
 
 
 0.999
KRN24041.1
Hypothetical protein.
 
  
 0.995
KRN23373.1
Superfamily II DNA RNA helicase.
   
  
 0.961
KRN22072.1
Competence protein CelA.
 
  
 0.889
KRN22071.1
Metallo-beta-lactamase superfamily hydrolase.
 
  
 0.845
DprA
DNA protecting protein DprA.
 
  
 0.768
KRN21791.1
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.632
KRN23978.1
Competence protein.
   
  
 0.618
KRN24602.1
Single-stranded DNA binding protein (Ssb); Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.599
KRN23714.1
Single-stranded DNA-binding protein.
  
  
 0.599
Your Current Organism:
Weissella confusa
NCBI taxonomy Id: 1583
Other names: ATCC 10881, BCRC 14002, CCRC 14002, CCRC:14002, CCUG 30113, CIP 103172, CIP 54.169, DSM 20196, LMG 9497, LMG:9497, Lactobacillus confusa (sic), Lactobacillus confusus, Lactobacillus coprophilus subsp. confusus, NCIMB 9311, W. confusa, strain TCC 10881
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.