STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_26720Cyclin-T1; Belongs to the cyclin family. (1210 aa)    
Predicted Functional Partners:
Fcan01_27177
Cyclin-dependent kinase 12.
   
 0.940
Fcan01_12083
Uncharacterized protein.
   
 0.907
Fcan01_02607
RNA polymerase II elongation factor ELL2.
    
 0.870
Fcan01_23503
Transcription elongation factor SPT5.
   
 0.856
Fcan01_22228
Putative cyclin-dependent kinase 9.
   
 0.824
Fcan01_12132
Uncharacterized protein.
    
 
 0.789
Fcan01_21221
Negative elongation factor E.
    
 0.772
Fcan01_02173
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.756
Fcan01_07113
Transcription initiation factor IIB.
     
 0.710
Fcan01_02255
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
   
 
 0.709
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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