STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcan01_26260TATA-box-binding protein. (367 aa)    
Predicted Functional Partners:
Fcan01_18765
Transcription initiation factor TFIID subunit 3.
    
 0.764
Fcan01_05474
Transcription initiation factor TFIID subunit 3.
    
 0.764
Fcan01_14467
General transcription factor IIE subunit 1.
   
 0.757
Fcan01_07113
Transcription initiation factor IIB.
   
 0.754
Fcan01_22608
Transcription factor IIIB 90 kDa subunit.
   
 0.744
Fcan01_21722
Transcription initiation factor TFIID subunit 6.
   
 0.744
Fcan01_12383
Transcription initiation factor TFIID subunit 1.
    
 0.737
Fcan01_07973
Transcription initiation factor TFIID subunit 10.
    
 0.737
Fcan01_04575
Transcription initiation factor TFIID subunit 9.
    
 0.737
Fcan01_03668
Transcription initiation factor TFIID subunit 2.
    
 0.737
Your Current Organism:
Folsomia candida
NCBI taxonomy Id: 158441
Other names: F. candida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.